About NVT, I got an error.
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- Newbie
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About NVT, I got an error.
Hi,
Below is my error information.
"RSPHER: internal ERROR: 25 -37 4 -37"
"
Backtrace for this error:
Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
"
"
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun noticed that process rank 13 with PID 272948 on node exp-1-19 exited on signal 11 (Segmentation fault).
"
Thanks,
Guangsheng
Below is my error information.
"RSPHER: internal ERROR: 25 -37 4 -37"
"
Backtrace for this error:
Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
"
"
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun noticed that process rank 13 with PID 272948 on node exp-1-19 exited on signal 11 (Segmentation fault).
"
Thanks,
Guangsheng
-
- Global Moderator
- Posts: 418
- Joined: Mon Sep 13, 2021 11:02 am
Re: About NVT, I got an error.
Hi,
Please, upload a zip file that contains the input files and OUTCAR. Provide us also the information about the compiler and the setting of the parallel calculation.
Please, upload a zip file that contains the input files and OUTCAR. Provide us also the information about the compiler and the setting of the parallel calculation.
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- Newbie
- Posts: 4
- Joined: Mon Dec 06, 2021 4:26 pm
Re: About NVT, I got an error.
The VASP is compiled by the technician of XSEDE, I don't know the setting exactly.
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Re: About NVT, I got an error.
Hi,
I thought the vasp complied by
gcc/9.2.0
openmpi/3.1.6.
Attached file including the input files, and job script.
I thought the vasp complied by
gcc/9.2.0
openmpi/3.1.6.
Attached file including the input files, and job script.
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- Global Moderator
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- Joined: Mon Sep 13, 2021 11:02 am
Re: About NVT, I got an error.
We would need also the POSCAR file to try ourself.
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Re: About NVT, I got an error.
attached is my structure.
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- Global Moderator
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Re: About NVT, I got an error.
Hi,
I could reproduce the problem. It could be due to a bad initial structure for starting the MD. The suggestion is to get a more reasonable starting geometry for the MD by performing a (partial) geometry relaxation (no MD but just a standard relaxation) of your system consisting of let's say at least 5-10 steps. Then, use the CONTCAR file as POSCAR for starting the MD. Let's see if this help.
I could reproduce the problem. It could be due to a bad initial structure for starting the MD. The suggestion is to get a more reasonable starting geometry for the MD by performing a (partial) geometry relaxation (no MD but just a standard relaxation) of your system consisting of let's say at least 5-10 steps. Then, use the CONTCAR file as POSCAR for starting the MD. Let's see if this help.