Visualize vibrational eigenvectors.

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Sharani
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Visualize vibrational eigenvectors.

#1 Post by Sharani » Tue Mar 01, 2011 8:32 pm

Hello,
Can I use VMD (Visual Molecular Dynamics) to view the vibrational eigenvectors of a system obtained from a IBRION = 5 calculation? The eigenvectors are listed in the OUTCAR file but I want to be able to see the motions. If VMD does not have the capability, is there a different package I could use?

Thank you!

Sharani
Last edited by Sharani on Tue Mar 01, 2011 8:32 pm, edited 1 time in total.

Vlad

Visualize vibrational eigenvectors.

#2 Post by Vlad » Fri Mar 25, 2011 8:12 pm

Hi! JMol can show animation of the modes.
Last edited by Vlad on Fri Mar 25, 2011 8:12 pm, edited 1 time in total.

beck
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Visualize vibrational eigenvectors.

#3 Post by beck » Sun Mar 27, 2011 5:55 am

Hi.
wxDragon also can be used.
Last edited by beck on Sun Mar 27, 2011 5:55 am, edited 1 time in total.

pkroll
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Visualize vibrational eigenvectors.

#4 Post by pkroll » Wed Mar 30, 2011 3:42 am

yeah. wxDragon is an excellent program for doing that !
Last edited by pkroll on Wed Mar 30, 2011 3:42 am, edited 1 time in total.

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