ab inition MD running out of memory, IWAVRP = 2 no longer available?
Posted: Tue Sep 13, 2022 11:37 am
I'm trying to run ab initio MD for a fairly large system, 2024 atoms. Initially things work fine, but at the end of the second iteration my job crashes with an out of memory error.
I thought one of the ways to reduce the required memory would be to set IWAVPR = 2, so that a number of arrays would be stored on disk rather than kept in memory. However, a post on the forum here from 2015 tells me that the file TMPCAR is no longer used (I use VASP 5.4.4). And indeed, even if I set IWAVPR = 2 in the INCAR file, the OUTCAR file tells me IWAVPR set to 12.
Is there a way in VASP 5.4.4 to reduce memory requirements in ab initio MD by having the arrays with old orbital data stored on disk?
My INCAR file and a few stdout/stderr lines around the crash point are shown below.
-----------------------------------------
I24 ab initio MD
ISTART = 1
ENCUT = 250.0
IALGO = 48
PREC = low
LREAL = .TRUE.
ISMEAR = 1
SIGMA = 0.3
VOSKOWN = 1
ISPIN = 2
MAGMOM = 2024*2
IBRION = 0
POTIM = 2.0
NELM = 150
NSW = 100000
TEBEG = 400
TEEND = 400
NBLOCK = 1
KBLOCK = 100000
SMASS = 0
NWRITE = 0
IWAVPR = 2
LCHARG = .FALSE.
NCORE = 48
----------------------------------------
RMM: 26 -0.165121636729E+05 -0.21999E-03 -0.12381E-04 25373 0.428E-03 0.205E-01
RMM: 27 -0.165121636908E+05 -0.17904E-04 -0.11692E-04 25320 0.430E-03
2 T= 397. E= -.16408298E+05 F= -.16512164E+05 E0= -.16514090E+05 EK= 0.10387E+03 SP= -.64E-04 SK= 0.16E-04 mag= 4422.593
slurmstepd: error: Detected 10 oom-kill event(s) in StepId=1065044.0. Some of your processes may have been killed by the cgroup out-of-memory handler.
srun: error: cmp094: tasks 442,464,478: Out Of Memory
I thought one of the ways to reduce the required memory would be to set IWAVPR = 2, so that a number of arrays would be stored on disk rather than kept in memory. However, a post on the forum here from 2015 tells me that the file TMPCAR is no longer used (I use VASP 5.4.4). And indeed, even if I set IWAVPR = 2 in the INCAR file, the OUTCAR file tells me IWAVPR set to 12.
Is there a way in VASP 5.4.4 to reduce memory requirements in ab initio MD by having the arrays with old orbital data stored on disk?
My INCAR file and a few stdout/stderr lines around the crash point are shown below.
-----------------------------------------
I24 ab initio MD
ISTART = 1
ENCUT = 250.0
IALGO = 48
PREC = low
LREAL = .TRUE.
ISMEAR = 1
SIGMA = 0.3
VOSKOWN = 1
ISPIN = 2
MAGMOM = 2024*2
IBRION = 0
POTIM = 2.0
NELM = 150
NSW = 100000
TEBEG = 400
TEEND = 400
NBLOCK = 1
KBLOCK = 100000
SMASS = 0
NWRITE = 0
IWAVPR = 2
LCHARG = .FALSE.
NCORE = 48
----------------------------------------
RMM: 26 -0.165121636729E+05 -0.21999E-03 -0.12381E-04 25373 0.428E-03 0.205E-01
RMM: 27 -0.165121636908E+05 -0.17904E-04 -0.11692E-04 25320 0.430E-03
2 T= 397. E= -.16408298E+05 F= -.16512164E+05 E0= -.16514090E+05 EK= 0.10387E+03 SP= -.64E-04 SK= 0.16E-04 mag= 4422.593
slurmstepd: error: Detected 10 oom-kill event(s) in StepId=1065044.0. Some of your processes may have been killed by the cgroup out-of-memory handler.
srun: error: cmp094: tasks 442,464,478: Out Of Memory