How is the nearest neighbor list calculated?

Queries about input and output files, running specific calculations, etc.


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guofengw

How is the nearest neighbor list calculated?

#1 Post by guofengw » Tue Apr 03, 2007 3:15 pm

I am learning to use VASP and doing a test for an orthorhombic crystal. I get some un-physical results and find that nearest-neighbor list in the "OUTCAR" is wrong. I recalculate the nearest-neighbor list using my own code and yield correct answers. Is there anything I should or should not do in the "INCAR" and "POSCAR" to eliminate the problem?
Last edited by guofengw on Tue Apr 03, 2007 3:15 pm, edited 1 time in total.

admin
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How is the nearest neighbor list calculated?

#2 Post by admin » Fri Apr 06, 2007 10:04 am

the distance between two atoms is calculated from the length of the vector connecting them.
Your POSCAR must be unreasonable. Please have a look in the online handbook how to set up a POSCAR file correctly.
Mind that
--) the units of length in vasp is Angstroem
--) the difference between direct and carthesian coordinates
--) vasp is based on periodic boundary conditions.
Last edited by admin on Fri Apr 06, 2007 10:04 am, edited 1 time in total.

zaz
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How is the nearest neighbor list calculated?

#3 Post by zaz » Fri Feb 24, 2012 10:16 am

I have the same problem with NN, as the guofengw question of 2007.
Thanks
Last edited by zaz on Fri Feb 24, 2012 10:16 am, edited 1 time in total.

Danny
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How is the nearest neighbor list calculated?

#4 Post by Danny » Wed Feb 29, 2012 5:34 pm

have you compared the values with a third party (eg VESTA, note that you need direct coordinates for that program)
Last edited by Danny on Wed Feb 29, 2012 5:34 pm, edited 1 time in total.

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