Phonon modes with DFPT (IBRION = 8)
Posted: Wed Jun 23, 2010 10:04 pm
Hi,
I am trying to do a calculation for phonon modes using the IBRION =8 option in Vasp 5.2. I have optimized the structure, and I am using a 2 by 2 supercell of the original structure for the phonon calculation. I am using 32 nodes (processors) to run the job. I get the following error with NPAR=1:
"Linear response reoptimize wavefunctions to high precision
MPI process terminated unexpectedly"
The job is getting killed at the first cycle of energy calculation. It looks to me there is some problem with the communication bandwidth.
I tried to fix the issue by using NPAR = 2/4/8 etc. but it only seemed to be working (i.e ran for quite a few cycles) for NPAR=2 (other values of NPAR did not make any difference) but after a while I get the following error message:
-----------------------------------------------------------------------------
| |
| EEEEEEE RRRRRR RRRRRR OOOOOOO RRRRRR ### ### ### |
| E R R R R O O R R ### ### ### |
| E R R R R O O R R ### ### ### |
| EEEEE RRRRRR RRRRRR O O RRRRRR # # # |
| E R R R R O O R R |
| E R R R R O O R R ### ### ### |
| EEEEEEE R R R R OOOOOOO R R ### ### ### |
| |
| VASP internal routines have requested a change of the k-point set. |
| Unfortunately this is only possible if NPAR=number of nodes. |
| Please remove the tag NPAR from the INCAR file and restart the |
| calculations. |
| |
| ----> I REFUSE TO CONTINUE WITH THIS SICK JOB ..., BYE!!! <---- |
| |
-----------------------------------------------------------------------------
I tried NPAR=32 (i.e. total number of nodes) and NPAR=1, it did not work.
Can anyone help me to resolve this issue? Any help will be greatly appreciated.
I'd like to mention here that I obtained the phonon modes using the IBRION=5 option without any problem for the same system (i.e. the same 2 by 2 supercell but using selective dynamics option to displace only the unit cell atoms). And I got very reasonable results.
Thank you.
Best Regards,
Ferdows
---------------------------
Here are the input files I am using:
INCAR
-------
SYSTEM = DHT low energy relaxation
ISMEAR = 0 ! Gaussian smearing
SIGMA = 0.05
ISTART = 0 !1 means restart from wavecar
ENCUT = 400
ALGO = vFast
EDIFF = 1E-7
PREC = A
LREAL = A
IBRION = 8
ADDGRID = .TRUE.
EDIFFG = -0.005 !eV/Ang
NELMIN = 4
LEPSILON = .TRUE.
## for small communication bandwidth ##
NPAR = 2
#NSIM = 4
#IRMMD = 4
POSCAR
---------
SYSTEM: Bi2Te3 bulk vibration 2 by 2 by 1 supercell
1.000
7.707188205240295 4.187106074597922 19.68315992116976
0 8.771123491943904 19.68315992116976
0 0 10.7744998931885
12 8
direct
0.00000 0.00000 -0.00000
0.00000 0.50000 0.00000
0.50000 -0.00000 -0.00000
0.50000 0.50000 0.00000
0.10600 0.10600 0.21200
0.10600 0.60600 0.21200
0.60600 0.10600 0.21200
0.60600 0.60600 0.21200
0.39400 0.39400 0.78800
0.39400 0.89400 0.78800
0.89400 0.39400 0.78800
0.89400 0.89400 0.78800
0.20000 0.20000 0.40000
0.20000 0.70000 0.40000
0.70000 0.20000 0.40000
0.70000 0.70000 0.40000
0.30000 0.30000 0.60000
0.30000 0.80000 0.60000
0.80000 0.30000 0.60000
0.80000 0.80000 0.60000
KPOINTS
-----------
Auto K-Points
0
g
6 6 6
0 0 0
POTCAR
---------
paw_PBE for Bi and Te
I am trying to do a calculation for phonon modes using the IBRION =8 option in Vasp 5.2. I have optimized the structure, and I am using a 2 by 2 supercell of the original structure for the phonon calculation. I am using 32 nodes (processors) to run the job. I get the following error with NPAR=1:
"Linear response reoptimize wavefunctions to high precision
MPI process terminated unexpectedly"
The job is getting killed at the first cycle of energy calculation. It looks to me there is some problem with the communication bandwidth.
I tried to fix the issue by using NPAR = 2/4/8 etc. but it only seemed to be working (i.e ran for quite a few cycles) for NPAR=2 (other values of NPAR did not make any difference) but after a while I get the following error message:
-----------------------------------------------------------------------------
| |
| EEEEEEE RRRRRR RRRRRR OOOOOOO RRRRRR ### ### ### |
| E R R R R O O R R ### ### ### |
| E R R R R O O R R ### ### ### |
| EEEEE RRRRRR RRRRRR O O RRRRRR # # # |
| E R R R R O O R R |
| E R R R R O O R R ### ### ### |
| EEEEEEE R R R R OOOOOOO R R ### ### ### |
| |
| VASP internal routines have requested a change of the k-point set. |
| Unfortunately this is only possible if NPAR=number of nodes. |
| Please remove the tag NPAR from the INCAR file and restart the |
| calculations. |
| |
| ----> I REFUSE TO CONTINUE WITH THIS SICK JOB ..., BYE!!! <---- |
| |
-----------------------------------------------------------------------------
I tried NPAR=32 (i.e. total number of nodes) and NPAR=1, it did not work.
Can anyone help me to resolve this issue? Any help will be greatly appreciated.
I'd like to mention here that I obtained the phonon modes using the IBRION=5 option without any problem for the same system (i.e. the same 2 by 2 supercell but using selective dynamics option to displace only the unit cell atoms). And I got very reasonable results.
Thank you.
Best Regards,
Ferdows
---------------------------
Here are the input files I am using:
INCAR
-------
SYSTEM = DHT low energy relaxation
ISMEAR = 0 ! Gaussian smearing
SIGMA = 0.05
ISTART = 0 !1 means restart from wavecar
ENCUT = 400
ALGO = vFast
EDIFF = 1E-7
PREC = A
LREAL = A
IBRION = 8
ADDGRID = .TRUE.
EDIFFG = -0.005 !eV/Ang
NELMIN = 4
LEPSILON = .TRUE.
## for small communication bandwidth ##
NPAR = 2
#NSIM = 4
#IRMMD = 4
POSCAR
---------
SYSTEM: Bi2Te3 bulk vibration 2 by 2 by 1 supercell
1.000
7.707188205240295 4.187106074597922 19.68315992116976
0 8.771123491943904 19.68315992116976
0 0 10.7744998931885
12 8
direct
0.00000 0.00000 -0.00000
0.00000 0.50000 0.00000
0.50000 -0.00000 -0.00000
0.50000 0.50000 0.00000
0.10600 0.10600 0.21200
0.10600 0.60600 0.21200
0.60600 0.10600 0.21200
0.60600 0.60600 0.21200
0.39400 0.39400 0.78800
0.39400 0.89400 0.78800
0.89400 0.39400 0.78800
0.89400 0.89400 0.78800
0.20000 0.20000 0.40000
0.20000 0.70000 0.40000
0.70000 0.20000 0.40000
0.70000 0.70000 0.40000
0.30000 0.30000 0.60000
0.30000 0.80000 0.60000
0.80000 0.30000 0.60000
0.80000 0.80000 0.60000
KPOINTS
-----------
Auto K-Points
0
g
6 6 6
0 0 0
POTCAR
---------
paw_PBE for Bi and Te