How to define POSCAR file for Defects !
Posted: Wed Nov 10, 2010 3:24 pm
Hi everyone !
I wanted to learn, how can I write a POSCAR file for a defect(s) in my system
For Ex. I have a 1x1x1 supercell of a bulk UO2 system and at present my POSCAR is the following with Uranium atoms at corners and face centers & all Oxygen at tetrahedral voids.
System UO2:
5.47040000000000
1.0000000000000000 0.0000000000000000 0.0000000000000000
0.0000000000000000 1.0000000000000000 0.0000000000000000
0.0000000000000000 0.0000000000000000 1.0000000000000000
4 8
Selective dynamics
Direct
0.0000000000000000 0.0000000000000000 0.0000000000000000 T T T
0.5000000000000000 0.5000000000000000 0.0000000000000000 T T T
0.5000000000000000 0.0000000000000000 0.5000000000000000 T T T
0.0000000000000000 0.5000000000000000 0.5000000000000000 T T T
0.2500000000000000 0.2500000000000000 0.2500000000000000 T T T
0.2500000000000000 0.7500000000000000 0.2500000000000000 T T T
0.7500000000000000 0.2500000000000000 0.2500000000000000 T T T
0.7500000000000000 0.7500000000000000 0.2500000000000000 T T T
0.2500000000000000 0.2500000000000000 0.7500000000000000 T T T
0.2500000000000000 0.7500000000000000 0.7500000000000000 T T T
0.7500000000000000 0.2500000000000000 0.7500000000000000 T T T
0.7500000000000000 0.7500000000000000 0.7500000000000000 T T T
Now, If I want to have a Uranium vacancy only at one ( out of eight ) of the corner lattice points. Then how do I represent that in POSCAR file above.
1. Do I have to define a bigger supercell / Also how I define a POSCAR for Supercell ?
2. Also how I specify no. of atoms and their positions. ?
I will appreciate if someone can help me figuring this out or guide me how to find ans.
PS : I am new to VASP, so pardon me if my question is silly. I can;t find such thread on this topic on Forum.
Thank for your time. Hoping some response.
Thanks
Anuj
I wanted to learn, how can I write a POSCAR file for a defect(s) in my system
For Ex. I have a 1x1x1 supercell of a bulk UO2 system and at present my POSCAR is the following with Uranium atoms at corners and face centers & all Oxygen at tetrahedral voids.
System UO2:
5.47040000000000
1.0000000000000000 0.0000000000000000 0.0000000000000000
0.0000000000000000 1.0000000000000000 0.0000000000000000
0.0000000000000000 0.0000000000000000 1.0000000000000000
4 8
Selective dynamics
Direct
0.0000000000000000 0.0000000000000000 0.0000000000000000 T T T
0.5000000000000000 0.5000000000000000 0.0000000000000000 T T T
0.5000000000000000 0.0000000000000000 0.5000000000000000 T T T
0.0000000000000000 0.5000000000000000 0.5000000000000000 T T T
0.2500000000000000 0.2500000000000000 0.2500000000000000 T T T
0.2500000000000000 0.7500000000000000 0.2500000000000000 T T T
0.7500000000000000 0.2500000000000000 0.2500000000000000 T T T
0.7500000000000000 0.7500000000000000 0.2500000000000000 T T T
0.2500000000000000 0.2500000000000000 0.7500000000000000 T T T
0.2500000000000000 0.7500000000000000 0.7500000000000000 T T T
0.7500000000000000 0.2500000000000000 0.7500000000000000 T T T
0.7500000000000000 0.7500000000000000 0.7500000000000000 T T T
Now, If I want to have a Uranium vacancy only at one ( out of eight ) of the corner lattice points. Then how do I represent that in POSCAR file above.
1. Do I have to define a bigger supercell / Also how I define a POSCAR for Supercell ?
2. Also how I specify no. of atoms and their positions. ?
I will appreciate if someone can help me figuring this out or guide me how to find ans.
PS : I am new to VASP, so pardon me if my question is silly. I can;t find such thread on this topic on Forum.
Thank for your time. Hoping some response.
Thanks
Anuj