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Visualize vibrational eigenvectors.

Posted: Tue Mar 01, 2011 8:32 pm
by Sharani
Hello,
Can I use VMD (Visual Molecular Dynamics) to view the vibrational eigenvectors of a system obtained from a IBRION = 5 calculation? The eigenvectors are listed in the OUTCAR file but I want to be able to see the motions. If VMD does not have the capability, is there a different package I could use?

Thank you!

Sharani

Visualize vibrational eigenvectors.

Posted: Fri Mar 25, 2011 8:12 pm
by Vlad
Hi! JMol can show animation of the modes.

Visualize vibrational eigenvectors.

Posted: Sun Mar 27, 2011 5:55 am
by beck
Hi.
wxDragon also can be used.

Visualize vibrational eigenvectors.

Posted: Wed Mar 30, 2011 3:42 am
by pkroll
yeah. wxDragon is an excellent program for doing that !